Protein ZmTRAF25
ZmTRAF25 is a protein in the TRAF family.
Information
Coreg Name: ZmTRAF25
Species: Maize
Coreg Family: TRAF
Gene Name(Synonym): MAB25
Uniprot ID: B4FKN4

Protein ZmTRAF25

ZmTRAF25 is a protein in the TRAF family.

Overview of domains present in v5 transcripts
PF00651
Zm00001eb274310_T001
Zm00001eb274310_T002

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d036646DAPseq no logo sequence fimo position
Zm00001d036646DAPseq no logo sequence fimo position
Zm00001d036646ChIPseq no logo sequence fimo position
Zm00001d036646PChIPseq no logo sequence fimo position

Interactions where ZmTRAF25 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmTRAF25 is the target  
Expand


There are 62 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb274310_T001 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF00651
PF00651
Hover here to show all domains

Nucleotide Sequence
Copy to clipboard
     
Expand

CGCTTGGGAACCTGCGGTGCGGCAG...

GRMZM2G088086_T01 from maize genome v3


Related TFome: pUT5658

Amino Acid Sequence
Copy to clipboard

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

Nucleotide Sequence
Copy to clipboard
     
Expand

GGTGTTTTGGCTGACGCTTGGGAAC...

Zm00001d036646_T001 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWERDKDKLLRASLRCRLVCPSQPHLHASIEKSV
SHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLPVPLPPPSDLHQHFDELLQSKNGADV
TFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHFIYTDMVPELDGAQEPEAAAIMAQHL
LVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRSPETLEAVLATDGYAHLAASCPLVLA
ELLMAARGRKI

Nucleotide Sequence
Copy to clipboard
     
Expand

GTCCGTCGATCATACCGCATACCGC...

Zm00001d036646_T002 from maize genome v4

Amino Acid Sequence
Copy to clipboard

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVAADMYGLNRLKLICECKLSGGIDIGTAASTLALAEQHDCSLLKAKCLEFITRS
PETLEAVLATDGYAHLAASCPLVLAELLMAARGRKI

Nucleotide Sequence
Copy to clipboard
     
Expand

ACTCCCTCCTCGTCGCTTGCCACAA...

Zm00001eb274310_T002 from maize genome v5

Amino Acid Sequence
Copy to clipboard

MDHDGTNLAVNEAVRSVQLLKIDGYSATATMSELDFIKSRRNLAGHEWEVLFYPQFSRYGGCIALKLVLVSEPPRDKDKL
LRASLRCRLVCPSQPHLHASIEKSVSHVFTSDSRCSSEVILIPKYELPSSGYLVNDSLTVECTVTVLRDLDATAKVLSLP
VPLPPPSDLHQHFDELLQSKNGADVTFRVSGKSFAAHKAILAARSPVFMAQFFGGMKERSSAHVEIRDMDSAAFSSMLHF
IYTDMVPELDGAQEPEAAAIMAQHLLVWAEQAEADM

Nucleotide Sequence
Copy to clipboard
     
Expand

CGCTTGGGAACCTGCGGTGCGGCAG...


Copyright © 2023 Grassius.org | Last updated: 2023-06-26